	ACT :: Analysis of Common Targets for circular RNAs ::
The Laboratory of X-omics

ACT

:: Analysis of Common Targets for circular RNAs ::

The Laboratory of
X-omics

ACT takes the sequence and processes as circular configuration. Common target genes, defined as coregulated genes by circRNA-associated miRNAs, will be exported and ranked by the targeting frequency (time). ACT currently supports the miRNAs and targets of miRNAs from Homo sapiens.

Input sequence here:

>Example_Seq_HIPK3_2_2
GTATGGCCTCACAAGTCTTGGTCTACCCACCATATGTTTATCAAACTCAG
TCAAGTGCCTTTTGTAGTGTGAAGAAACTCAAAGTAGAGCCAAGCAGTTG
TGTATTCCAGGAAAGAAACTATCCACGGACCTATGTGAATGGTAGAAACT
TTGGAAATTCTCATCCTCCCACTAAGGGTAGTGCTTTTCAGACAAAGATA
CCATTTAATAGACCTCGAGGACACAACTTTTCATTGCAGACAAGTGCTGT
TGTTTTGAAAAACACTGCAGGTGCTACAAAGGTCATAGCAGCTCAGGCAC
AGCAAGCTCACGTGCAGGCACCTCAGATTGGGGCGTGGCGAAACAGATTG
CATTTCCTAGAAGGCCCCCAGCGATGTGGATTGAAGCGCAAGAGTGAGGA
GTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCATAC
TTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACA
GCTACCACAGGATCAAAACAGAATTGTACCACTGGAGAAGGTGACTATCA
GTTAGTACAGCATGAAGTCTTATGCTCCATGAAAAATACTTACGAAGTCC
TTGATTTTCTTGGTCGAGGCACGTTTGGCCAGGTAGTTAAATGCTGGAAA
AGAGGGACAAATGAAATTGTAGCAATCAAAATTTTGAAGAATCATCCTTC
TTATGCCCGTCAAGGTCAAATAGAAGTGAGCATATTAGCAAGGCTCAGTA
CTGAAAATGCTGATGAATATAACTTTGTACGAGCTTATGAATGCTTTCAG
CACCGTAACCATACTTGTTTAGTCTTTGAGATGCTGGAACAAAACTTGTA
TGACTTTCTGAAACAAAATAAATTTAGTCCCCTGCCACTAAAAGTGATTC
GGCCCATTCTTCAACAAGTGGCCACTGCACTGAAAAAATTGAAAAGTCTT
GGTTTAATTCATGCTGATCTCAAGCCAGAGAATATTATGTTGGTGGATCC
TGTTCGGCAGCCTTACAGGGTTAAAGTAATAGACTTTGGGTCGGCCAGTC
ATGTATCAAAGACTGTTTGTTCAACATATCTACAATCTCGGTACTACAG

Select a sequence file to process or paste the sequence in FASTA format (length of total inputted sequences limited to 10,000 nt). See example of output (circHIPK3) HERE. E-mail (optional) Use to inform user of the link for results and/or to respond problems. Citation:
Lin YC, Lee YC, Chang KL, Hsiao KY. (2019) Analysis of common targets for circular RNAs. BMC Bioinformatics 20, 372.

2018 Laboratory of X-omics

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